Protein ZmOrphan142
ZmOrphan142 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan142
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym): PRH9
Uniprot ID: C0HHW8

Protein ZmOrphan142

ZmOrphan142 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481PF13672
Zm00001eb344210_T003
Zm00001eb344210_T001
Zm00001eb344210_T002
Zm00001eb344210_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d009626DAPseq no logo sequence fimo position
Zm00001d009626DAPseq no logo sequence fimo position
Zm00001d009626ChIPseq no logo sequence fimo position
Zm00001d009626PChIPseq no logo sequence fimo position

Interactions where ZmOrphan142 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan142 is the target  
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There are 335 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb344210_T003 from maize genome v5

Amino Acid Sequence
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MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKPDRPDE
MQRVEAAGGRVVNWNGYRVLGVLATSRSIGKKKRRPIISFHDPSRFHICHTVLSVAAIAPGDYYLKPYVSAEPEVTVVER
TERDEFLILASDGLWDVVSNEAACKIARSCLSGRAASRFPGSVAGRTAADAAALLAELALSRGSRDNISVVVVELRRLQT
DQMTRV

MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKPDRPDE
MQRVEAAGGRVVNWNGYRVLGVLATSRSIGKKKRRPIISFHDPSRFHICHTVLSVAAIAPGDYYLKPYVSAEPEVTVVER
TERDEFLILASDGLWDVVSNEAACKIARSCLSGRAASRFPGSVAGRTAADAAALLAELALSRGSRDNISVVVVELRRLQT
DQMTRV

MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKPDRPDE
MQRVEAAGGRVVNWNGYRVLGVLATSRSIGKKKRRPIISFHDPSRFHICHTVLSVAAIAPGDYYLKPYVSAEPEVTVVER
TERDEFLILASDGLWDVVSNEAACKIARSCLSGRAASRFPGSVAGRTAADAAALLAELALSRGSRDNISVVVVELRRLQT
DQMTRV

MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKPDRPDE
MQRVEAAGGRVVNWNGYRVLGVLATSRSIGKKKRRPIISFHDPSRFHICHTVLSVAAIAPGDYYLKPYVSAEPEVTVVER
TERDEFLILASDGLWDVVSNEAACKIARSCLSGRAASRFPGSVAGRTAADAAALLAELALSRGSRDNISVVVVELRRLQT
DQMTRV

MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKPDRPDE
MQRVEAAGGRVVNWNGYRVLGVLATSRSIGKKKRRPIISFHDPSRFHICHTVLSVAAIAPGDYYLKPYVSAEPEVTVVER
TERDEFLILASDGLWDVVSNEAACKIARSCLSGRAASRFPGSVAGRTAADAAALLAELALSRGSRDNISVVVVELRRLQT
DQMTRV

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
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Nucleotide Sequence
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CTAACATTTGTCCCTGGGACACAGT...

GRMZM5G818101_T01 from maize genome v3

Amino Acid Sequence
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MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKVRTSHG
RRLRMHNNKLKHGCCRLG

Nucleotide Sequence
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GGCCTCGTTTCTTCGCCGTCGCTTT...

GRMZM5G818101_T02 from maize genome v3


Related TFome: pUT4796

Amino Acid Sequence
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MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKPDRPDE
MQRVEAAGGRVVNWNGYRVLGVLATSRSIGDYYLKPYVSAEPEVTVVERTERDEFLILASDGLWDVVSNEAACKIARSCL
SGRAASRFPGSVAGRTAADAAALLAELALSRGSRDNISVVVVELRRLQTDQMTRV

Nucleotide Sequence
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CGCCGTCGCTTTGCGAGTGTGGACG...

Zm00001d009626_T001 from maize genome v4

Amino Acid Sequence
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MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKPDRPDE
MQRVEAAGGRVVNWNGYRVLGVLATSRSIGDYYLKPYVSAEPEVTVVERTERDEFLILASDGLWDVVSNEAACKIARSCL
SGRAASRFPGSVAGRTAADAAALLAELALSRGSRDNISVVVVELRRLQTDQMTRV

Nucleotide Sequence
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GTTTCTTCGCCGTCGCTTTGCGAGT...

Zm00001eb344210_T001 from maize genome v5

Amino Acid Sequence
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MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKDFSSLP
NVPSRLNHHDDFHRRVSVSVTLFQCPLANFAAGPARPELVAVVGWYRSMLMRWDDT

Nucleotide Sequence
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CTAACATTTGTCCCTGGGACACAGT...

Zm00001eb344210_T002 from maize genome v5

Amino Acid Sequence
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MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKPDRPDE
MQRVEAAGGRVVNWNGYRVLGVLATSRSIASLPLLQATTT

Nucleotide Sequence
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CTAACATTTGTCCCTGGGACACAGT...

Zm00001eb344210_T004 from maize genome v5

Amino Acid Sequence
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MRENGAARDEGPALCKAAAADGGGDVGAASARRRRRLGRATEGPAPTKRIRSGSQRSPYDSSLETATDGCCWPARLSHGA
VSVIGRRREMEDAFAVALSFLASEAVGGEQEQELDFFAVYDGHGGARVAEACRERMHVVLAEEVGLRRRRSGSDDLRWEE
AMAASFARVDGEVTGGLSSPHHDDAGSSLPYRTVGSTAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKPDRPDE
MQRVEAAGGRVVNWNGYRVLGVLATSRSIGDYYLKPYVSAEPEVTVVERTERDEFLILASDGLWDVVSNEAACKIARSCL
SGRAASRFPGSVAGRTAADAAALLAELALSRGSRDNISVVVVELRRLQTDQMTRV

Nucleotide Sequence
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CTAACATTTGTCCCTGGGACACAGT...

Zm00001eb344220_T001 from maize genome v5

Amino Acid Sequence
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MASSQRRSSLPLRRRRRPTSSASTTCIRSRHASATLAPPWPSYTAKKSSSCSCSPPTASEARNESATANASSISLRRPIT
DTAPCDRRAGQQQPSVAVSRDESYGDLCDPDRILFVGAGPSVARPSRRRRRAEAAPTSPPPSAAAALHKAGPSSLAAPFS
LMYPSRPHSQSDGEETRPATRGVEPGFKNDRRPRRTGRRGGGRRIPRERLGARQRRGDVDGRDRRGRVAWARPMRPPGLP
RRKYPVRPAHGPRRAARVARASGPLRAVTLALGGARARGGSERLDHRVARWAPPGGLRGGGPRKGGRGARRAMRLCPRDK
C

Nucleotide Sequence
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GGAACATTCGGGAGACTGCTAAAAT...


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